OMA: MSA of HOG:E0749165 at Euarchontoglires

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

HOG:E0749165 with 50 members (Peptidase S1 domain-containing protein)

Gnathostomata / Euteleostomi / Sarcopterygii / Tetrapoda / Amniota / Mammalia / Theria /

... /

Eutheria / Boreoeutheria /

Euarchontoglires /

Completeness score: 1.00

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Label

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RABIT11037

OCHPR09099

DIPOR05016

FUKDA10578

HETGA25586

CAVAP08075

CAVPO10941

CHILA18713

OCTDE03486

JACJA10709

CRIGR08266

MOUSE57964

RATNO14957

NANGA10848

ICTTR11898

CERAT01048

CERAT01049

CHLSB14802

CHLSB14803

MACFA25274

MACFA25278

MACMU26456

MACMU26470

MACNE07676

MANLE05463

PAPAN15705

COLAP21791

COLAP21794

RHIBE36507

RHIRO40424

GORGO10973

GORGO11958

GORGO12407

HUMAN29651

HUMAN29666

PANPA15625

PANTR12818

PANTR12819

PONAB10586

PONAB10599

NOMLE25981

AOTNA15639

CALJA21749

CEBIM17118

SAIBB32539

CARSF10613

MICMU11497

PROCO07193

OTOGA10755

TUPBE09410